Rename RGCCA classes and prefix them with "rgcca_".
Merge documentation of print functions.
Merge documentation of plot functions.
Environment variable TEST_SNAPSHOTS must be set to "TRUE" for snapshots to be evaluated.
NEWS.md file to track changes to the package.Many differences have been introduced since the last version published on CRAN. We list below the most important ones:
rgcca is now the main entry point of the package.method argument in the rgcca function.
The list of methods can be found using the available_methods function.A and C of the rgcca function are now deprecated. blocks
and connection should be used instead.rgcca_transform and rgcca_predict have been added. They allow
applying fitted RGCCA models to project new subjects onto the learned subspaces
and make predictions of response blocks using caret predictive models.rgcca_cv and rgcca_permutation have been added. They allow for
finding the best parameters of the models based on a cross-validation or
permutation criterion.rgcca_bootstrap has been added to evaluate the weights of a
model using a bootstrap procedure.rgcca_stability has been added to evaluate the stability of
the variable selection performed by SGCCA.rgcca, rgcca_cv, rgcca_permutation, rgcca_bootstrap,
and rgcca_stability.